Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC144BQ3MJ40 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC144BQ3MJ40 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC144BQ3MJ40 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC144BQ3MJ40 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC144BQ3MJ40 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC144BQ3MJ40 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC144BQ3MJ40 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC144BQ3MJ40 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC144BQ3MJ40 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC144BQ3MJ40 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.64■□□□□ 0.42
CCDC144BQ3MJ40 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 BCYRN1-201ENST00000418539 200 ntBASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 C2orf27AP3-201ENST00000434123 579 ntBASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 PFN1P12-201ENST00000455938 534 ntBASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 AC107373.2-201ENST00000607735 490 ntBASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 AL354718.3-201ENST00000616414 581 ntBASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 CR382287.1-201ENST00000623954 586 ntBASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 AC005840.4-201ENST00000541242 2494 ntBASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CCDC144BQ3MJ40 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 AJ011931.1-201ENST00000618749 2492 ntBASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 AC099548.2-209ENST00000480264 625 ntBASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 AP001582.1-201ENST00000525856 295 ntBASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC144BQ3MJ40 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC144BQ3MJ40 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCDC144BQ3MJ40 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC144BQ3MJ40 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC144BQ3MJ40 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC144BQ3MJ40 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms