Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.63□□□□□ -0.23
SCN1BQ07699 FAM58CP-201ENST00000435741 640 ntBASIC13.63□□□□□ -0.23
SCN1BQ07699 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.63□□□□□ -0.23
SCN1BQ07699 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.63□□□□□ -0.23
SCN1BQ07699 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 MIR4321-201ENST00000592276 80 ntBASIC13.63□□□□□ -0.23
SCN1BQ07699 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 AC091812.2-201ENST00000619081 385 ntBASIC13.63□□□□□ -0.23
SCN1BQ07699 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SCN1BQ07699 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.63□□□□□ -0.23
SCN1BQ07699 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SCN1BQ07699 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.63□□□□□ -0.23
SCN1BQ07699 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 AC015802.1-201ENST00000588104 1449 ntBASIC13.63□□□□□ -0.23
SCN1BQ07699 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.63□□□□□ -0.23
SCN1BQ07699 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SCN1BQ07699 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
SCN1BQ07699 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCN1BQ07699 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SCN1BQ07699 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.62□□□□□ -0.23
SCN1BQ07699 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.62□□□□□ -0.23
SCN1BQ07699 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SCN1BQ07699 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SCN1BQ07699 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.62□□□□□ -0.23
SCN1BQ07699 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 TFAMP1-201ENST00000412727 736 ntBASIC13.62□□□□□ -0.23
SCN1BQ07699 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.62□□□□□ -0.23
SCN1BQ07699 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.62□□□□□ -0.23
SCN1BQ07699 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.62□□□□□ -0.23
SCN1BQ07699 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.62□□□□□ -0.23
SCN1BQ07699 AC099522.2-201ENST00000607001 744 ntBASIC13.62□□□□□ -0.23
SCN1BQ07699 SPTSSB-204ENST00000617024 1292 ntBASIC13.62□□□□□ -0.23
SCN1BQ07699 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 AC105206.1-202ENST00000314927 2368 ntBASIC13.62□□□□□ -0.23
SCN1BQ07699 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.62□□□□□ -0.23
SCN1BQ07699 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.62□□□□□ -0.23
SCN1BQ07699 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SCN1BQ07699 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.62□□□□□ -0.23
SCN1BQ07699 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.62□□□□□ -0.23
SCN1BQ07699 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.62□□□□□ -0.23
SCN1BQ07699 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCN1BQ07699 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.62□□□□□ -0.23
SCN1BQ07699 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.61□□□□□ -0.23
SCN1BQ07699 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SCN1BQ07699 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.61□□□□□ -0.23
SCN1BQ07699 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SCN1BQ07699 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.61□□□□□ -0.23
SCN1BQ07699 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SCN1BQ07699 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms