Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC009517.1-201ENST00000454750 570 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC093826.1-201ENST00000508655 993 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 RN7SL440P-201ENST00000577855 343 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 MIR4254-201ENST00000581063 76 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 GGT3P-204ENST00000453783 1664 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC006529.1-201ENST00000459978 637 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC011431.1-201ENST00000512971 230 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC097359.3-201ENST00000603982 1210 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC009560.1-201ENST00000620208 434 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 AP000769.1-203ENST00000637245 208 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC002472.3-201ENST00000640124 621 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 E2F3P2-201ENST00000447755 1422 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 KRT8P31-201ENST00000504812 1408 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 HMGA1P2-201ENST00000430198 324 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 KLF2P1-201ENST00000447438 1042 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 IGHEP2-201ENST00000519308 1256 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC009093.2-202ENST00000620513 2079 ntBASIC13.84□□□□□ -0.19
CACNA1BQ00975 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CACNA1BQ00975 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CACNA1BQ00975 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CACNA1BQ00975 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CACNA1BQ00975 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.83□□□□□ -0.19
CACNA1BQ00975 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CACNA1BQ00975 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
CACNA1BQ00975 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CACNA1BQ00975 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CACNA1BQ00975 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.83□□□□□ -0.19
CACNA1BQ00975 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
CACNA1BQ00975 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms