Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.72□□□□□ -0.21
CDK5Q00535 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CDK5Q00535 AC051619.7-201ENST00000568314 623 ntBASIC13.72□□□□□ -0.21
CDK5Q00535 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.72□□□□□ -0.21
CDK5Q00535 AL109936.8-201ENST00000641772 604 ntBASIC13.72□□□□□ -0.21
CDK5Q00535 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.72□□□□□ -0.21
CDK5Q00535 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.72□□□□□ -0.21
CDK5Q00535 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDK5Q00535 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.72□□□□□ -0.21
CDK5Q00535 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDK5Q00535 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.71□□□□□ -0.21
CDK5Q00535 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDK5Q00535 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.71□□□□□ -0.21
CDK5Q00535 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CDK5Q00535 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.71□□□□□ -0.21
CDK5Q00535 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CDK5Q00535 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.71□□□□□ -0.21
CDK5Q00535 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 DNAJB3-201ENST00000446806 729 ntBASIC13.71□□□□□ -0.21
CDK5Q00535 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
CDK5Q00535 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.71□□□□□ -0.21
CDK5Q00535 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.71□□□□□ -0.21
CDK5Q00535 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.71□□□□□ -0.21
CDK5Q00535 TEX28P1-201ENST00000613479 1221 ntBASIC13.71□□□□□ -0.21
CDK5Q00535 TEX28P2-201ENST00000617764 1221 ntBASIC13.71□□□□□ -0.21
CDK5Q00535 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.71□□□□□ -0.21
CDK5Q00535 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.71□□□□□ -0.21
CDK5Q00535 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.71□□□□□ -0.21
CDK5Q00535 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CDK5Q00535 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDK5Q00535 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CDK5Q00535 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CDK5Q00535 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDK5Q00535 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDK5Q00535 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.7□□□□□ -0.22
CDK5Q00535 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CDK5Q00535 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CDK5Q00535 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.7□□□□□ -0.22
CDK5Q00535 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 HLA-K-203ENST00000430151 1046 ntBASIC13.7□□□□□ -0.22
CDK5Q00535 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.7□□□□□ -0.22
CDK5Q00535 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.7□□□□□ -0.22
CDK5Q00535 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDK5Q00535 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
CDK5Q00535 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.7□□□□□ -0.22
CDK5Q00535 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.7□□□□□ -0.22
CDK5Q00535 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.7□□□□□ -0.22
CDK5Q00535 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.7□□□□□ -0.22
CDK5Q00535 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDK5Q00535 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.7□□□□□ -0.22
CDK5Q00535 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms