Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CXCR4P61073 TCAM1P-207ENST00000485295 1537 ntBASIC13.89□□□□□ -0.19
CXCR4P61073 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CXCR4P61073 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 AL356585.2-201ENST00000625078 2396 ntBASIC13.88□□□□□ -0.19
CXCR4P61073 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 AC015909.5-201ENST00000624336 2266 ntBASIC13.88□□□□□ -0.19
CXCR4P61073 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 AGGF1P1-201ENST00000509500 2073 ntBASIC13.88□□□□□ -0.19
CXCR4P61073 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CXCR4P61073 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CXCR4P61073 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.88□□□□□ -0.19
CXCR4P61073 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 SLC25A39P2-201ENST00000537614 270 ntBASIC13.88□□□□□ -0.19
CXCR4P61073 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.88□□□□□ -0.19
CXCR4P61073 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.88□□□□□ -0.19
CXCR4P61073 AC015910.1-201ENST00000579400 975 ntBASIC13.88□□□□□ -0.19
CXCR4P61073 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 AC120114.3-201ENST00000611923 658 ntBASIC13.88□□□□□ -0.19
CXCR4P61073 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCR4P61073 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCR4P61073 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCR4P61073 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCR4P61073 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CXCR4P61073 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCR4P61073 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCR4P61073 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCR4P61073 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CXCR4P61073 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCR4P61073 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CXCR4P61073 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.87□□□□□ -0.19
CXCR4P61073 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.87□□□□□ -0.19
CXCR4P61073 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.87□□□□□ -0.19
CXCR4P61073 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms