Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SRP54P61011 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.02■□□□□ -0
SRP54P61011 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.02■□□□□ -0
SRP54P61011 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.02■□□□□ -0
SRP54P61011 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.02■□□□□ -0
SRP54P61011 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SRP54P61011 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.02■□□□□ -0
SRP54P61011 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.02■□□□□ -0
SRP54P61011 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.02■□□□□ -0
SRP54P61011 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.02■□□□□ -0
SRP54P61011 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.02■□□□□ -0
SRP54P61011 RPL13AP20-201ENST00000459725 609 ntBASIC15.02■□□□□ -0
SRP54P61011 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.02■□□□□ -0
SRP54P61011 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP54P61011 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
SRP54P61011 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.02■□□□□ -0
SRP54P61011 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.02■□□□□ -0
SRP54P61011 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.02■□□□□ -0
SRP54P61011 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SRP54P61011 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SRP54P61011 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRP54P61011 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.02□□□□□ -0.01
SRP54P61011 AC090616.6-203ENST00000579186 1945 ntBASIC15.02□□□□□ -0.01
SRP54P61011 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.02□□□□□ -0.01
SRP54P61011 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.02□□□□□ -0.01
SRP54P61011 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.02□□□□□ -0.01
SRP54P61011 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.01□□□□□ -0.01
SRP54P61011 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SRP54P61011 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SRP54P61011 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.01□□□□□ -0.01
SRP54P61011 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SRP54P61011 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.01□□□□□ -0.01
SRP54P61011 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.01□□□□□ -0.01
SRP54P61011 AC022616.1-201ENST00000518688 554 ntBASIC15.01□□□□□ -0.01
SRP54P61011 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SRP54P61011 MIR4525-201ENST00000580000 75 ntBASIC15.01□□□□□ -0.01
SRP54P61011 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.01□□□□□ -0.01
SRP54P61011 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.01□□□□□ -0.01
SRP54P61011 ENPP7P14-201ENST00000621765 1040 ntBASIC15.01□□□□□ -0.01
SRP54P61011 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SRP54P61011 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
SRP54P61011 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.01□□□□□ -0.01
SRP54P61011 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.01□□□□□ -0.01
SRP54P61011 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRP54P61011 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
SRP54P61011 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15□□□□□ -0.01
SRP54P61011 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SRP54P61011 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms