Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 INTS4P2-202ENST00000614726 2019 ntBASIC13.99□□□□□ -0.17
CLDN20P56880 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CLDN20P56880 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 GAPDHP21-201ENST00000450301 1010 ntBASIC13.99□□□□□ -0.17
CLDN20P56880 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.99□□□□□ -0.17
CLDN20P56880 AL359711.2-201ENST00000563105 872 ntBASIC13.99□□□□□ -0.17
CLDN20P56880 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.99□□□□□ -0.17
CLDN20P56880 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 AC090616.6-203ENST00000579186 1945 ntBASIC13.99□□□□□ -0.17
CLDN20P56880 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 AL365209.1-201ENST00000624418 6473 ntBASIC13.99□□□□□ -0.17
CLDN20P56880 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CLDN20P56880 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 AC006504.5-208ENST00000588784 2401 ntBASIC13.99□□□□□ -0.17
CLDN20P56880 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDN20P56880 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDN20P56880 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN20P56880 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 AC084364.1-201ENST00000551967 1556 ntBASIC13.98□□□□□ -0.17
CLDN20P56880 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN20P56880 AC134915.1-201ENST00000426461 574 ntBASIC13.98□□□□□ -0.17
CLDN20P56880 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
CLDN20P56880 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLDN20P56880 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN20P56880 AC132938.2-201ENST00000579188 680 ntBASIC13.98□□□□□ -0.17
CLDN20P56880 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN20P56880 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 AL033527.5-201ENST00000641382 801 ntBASIC13.98□□□□□ -0.17
CLDN20P56880 AL591163.1-201ENST00000641757 987 ntBASIC13.98□□□□□ -0.17
CLDN20P56880 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 AC010327.5-201ENST00000586923 3061 ntBASIC13.98□□□□□ -0.17
CLDN20P56880 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
CLDN20P56880 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN20P56880 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CLDN20P56880 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN20P56880 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN20P56880 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN20P56880 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms