Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC007787.1-201ENST00000588095 1583 ntBASIC15.34■□□□□ 0.05
LIMK2P53671 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.34■□□□□ 0.05
LIMK2P53671 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LIMK2P53671 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
LIMK2P53671 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.34■□□□□ 0.05
LIMK2P53671 AC007274.1-201ENST00000439805 662 ntBASIC15.34■□□□□ 0.05
LIMK2P53671 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.34■□□□□ 0.05
LIMK2P53671 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.34■□□□□ 0.05
LIMK2P53671 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.34■□□□□ 0.05
LIMK2P53671 HILS1-202ENST00000545329 423 ntBASIC15.34■□□□□ 0.05
LIMK2P53671 AC106886.1-201ENST00000568660 600 ntBASIC15.34■□□□□ 0.05
LIMK2P53671 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.34■□□□□ 0.05
LIMK2P53671 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.34■□□□□ 0.05
LIMK2P53671 AC000095.1-201ENST00000603208 874 ntBASIC15.34■□□□□ 0.05
LIMK2P53671 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.34■□□□□ 0.05
LIMK2P53671 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.34■□□□□ 0.05
LIMK2P53671 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LIMK2P53671 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LIMK2P53671 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 AC018529.2-202ENST00000611482 3087 ntBASIC15.34■□□□□ 0.05
LIMK2P53671 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.34■□□□□ 0.05
LIMK2P53671 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LIMK2P53671 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIMK2P53671 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.34■□□□□ 0.05
LIMK2P53671 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LIMK2P53671 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.34■□□□□ 0.05
LIMK2P53671 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.34■□□□□ 0.05
LIMK2P53671 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LIMK2P53671 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.33■□□□□ 0.05
LIMK2P53671 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.33■□□□□ 0.05
LIMK2P53671 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LIMK2P53671 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LIMK2P53671 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LIMK2P53671 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LIMK2P53671 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LIMK2P53671 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
LIMK2P53671 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.33■□□□□ 0.05
LIMK2P53671 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
LIMK2P53671 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK2P53671 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.33■□□□□ 0.04
LIMK2P53671 AC104596.2-201ENST00000512793 793 ntBASIC15.33■□□□□ 0.04
LIMK2P53671 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.33■□□□□ 0.04
LIMK2P53671 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK2P53671 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.33■□□□□ 0.04
LIMK2P53671 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.33■□□□□ 0.04
LIMK2P53671 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LIMK2P53671 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.33■□□□□ 0.04
LIMK2P53671 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK2P53671 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LIMK2P53671 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK2P53671 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK2P53671 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.33■□□□□ 0.04
LIMK2P53671 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LIMK2P53671 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LIMK2P53671 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LIMK2P53671 AC018442.1-201ENST00000421439 2061 ntBASIC15.32■□□□□ 0.04
LIMK2P53671 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LIMK2P53671 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms