Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HMGA2P52926 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 AC087499.5-201ENST00000452760 1342 ntBASIC13.85□□□□□ -0.19
HMGA2P52926 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.85□□□□□ -0.19
HMGA2P52926 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
HMGA2P52926 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
HMGA2P52926 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
HMGA2P52926 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 KRT8P24-201ENST00000560290 1559 ntBASIC13.84□□□□□ -0.19
HMGA2P52926 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 AL139400.1-201ENST00000366220 510 ntBASIC13.84□□□□□ -0.19
HMGA2P52926 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HMGA2P52926 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 AC112482.1-201ENST00000492080 688 ntBASIC13.84□□□□□ -0.19
HMGA2P52926 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.84□□□□□ -0.19
HMGA2P52926 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 TIMM17BP1-201ENST00000545713 516 ntBASIC13.84□□□□□ -0.19
HMGA2P52926 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 AL671883.3-201ENST00000603274 991 ntBASIC13.84□□□□□ -0.19
HMGA2P52926 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.84□□□□□ -0.19
HMGA2P52926 SPDYE12P-201ENST00000618416 771 ntBASIC13.84□□□□□ -0.19
HMGA2P52926 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
HMGA2P52926 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.84□□□□□ -0.19
HMGA2P52926 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
HMGA2P52926 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGA2P52926 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
HMGA2P52926 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
HMGA2P52926 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HMGA2P52926 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMGA2P52926 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMGA2P52926 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMGA2P52926 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
HMGA2P52926 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HMGA2P52926 DRD5P1-201ENST00000456605 1438 ntBASIC13.83□□□□□ -0.2
HMGA2P52926 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGA2P52926 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HMGA2P52926 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGA2P52926 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HMGA2P52926 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGA2P52926 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGA2P52926 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMGA2P52926 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.83□□□□□ -0.2
HMGA2P52926 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMGA2P52926 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMGA2P52926 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGA2P52926 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.83□□□□□ -0.2
HMGA2P52926 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGA2P52926 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGA2P52926 PRSS30P-206ENST00000641773 873 ntBASIC13.83□□□□□ -0.2
HMGA2P52926 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HMGA2P52926 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HMGA2P52926 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMGA2P52926 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGA2P52926 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms