Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CLCN4P51793 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLCN4P51793 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.86■□□□□ 0.13
CLCN4P51793 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.86■□□□□ 0.13
CLCN4P51793 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.86■□□□□ 0.13
CLCN4P51793 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.86■□□□□ 0.13
CLCN4P51793 AC138696.2-201ENST00000607376 223 ntBASIC15.86■□□□□ 0.13
CLCN4P51793 AC090164.2-201ENST00000611487 516 ntBASIC15.86■□□□□ 0.13
CLCN4P51793 AF254983.2-201ENST00000612331 135 ntBASIC15.86■□□□□ 0.13
CLCN4P51793 MIR6727-201ENST00000620702 65 ntBASIC15.86■□□□□ 0.13
CLCN4P51793 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 AC009093.2-202ENST00000620513 2079 ntBASIC15.86■□□□□ 0.13
CLCN4P51793 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN4P51793 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN4P51793 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.86■□□□□ 0.13
CLCN4P51793 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN4P51793 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN4P51793 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 AL137783.1-201ENST00000623494 1896 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN4P51793 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLCN4P51793 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.85■□□□□ 0.13
CLCN4P51793 AC010141.1-201ENST00000411585 623 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCN4P51793 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN4P51793 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCN4P51793 FTLP1-201ENST00000449155 526 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 EEF1DP6-201ENST00000449232 372 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 AC125604.1-201ENST00000496255 707 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN4P51793 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCN4P51793 DUX4L46-201ENST00000566845 751 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 AL136295.7-201ENST00000619226 1200 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLCN4P51793 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
CLCN4P51793 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 CICP11-201ENST00000434745 2827 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.85■□□□□ 0.13
CLCN4P51793 E2F3P2-201ENST00000447755 1422 ntBASIC15.85■□□□□ 0.13
CLCN4P51793 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN4P51793 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN4P51793 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN4P51793 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLCN4P51793 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN4P51793 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLCN4P51793 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
CLCN4P51793 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CLCN4P51793 AL157791.1-201ENST00000553667 1699 ntBASIC15.84■□□□□ 0.13
CLCN4P51793 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms