Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 SHC1P1-201ENST00000425230 1745 ntBASIC13.13□□□□□ -0.31
HCFC1P51610 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.13□□□□□ -0.31
HCFC1P51610 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HCFC1P51610 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 KRT8P21-201ENST00000430398 1491 ntBASIC13.13□□□□□ -0.31
HCFC1P51610 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 AC127383.1-201ENST00000444697 1800 ntBASIC13.13□□□□□ -0.31
HCFC1P51610 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HCFC1P51610 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.12□□□□□ -0.31
HCFC1P51610 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
HCFC1P51610 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 AP002414.2-201ENST00000591780 3365 ntBASIC13.12□□□□□ -0.31
HCFC1P51610 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
HCFC1P51610 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.12□□□□□ -0.31
HCFC1P51610 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.12□□□□□ -0.31
HCFC1P51610 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.12□□□□□ -0.31
HCFC1P51610 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.12□□□□□ -0.31
HCFC1P51610 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HCFC1P51610 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HCFC1P51610 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 REXO1L4P-201ENST00000605109 1937 ntBASIC13.12□□□□□ -0.31
HCFC1P51610 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 AL157414.3-201ENST00000624276 1954 ntBASIC13.12□□□□□ -0.31
HCFC1P51610 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HCFC1P51610 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.12□□□□□ -0.31
HCFC1P51610 AC022616.1-201ENST00000518688 554 ntBASIC13.12□□□□□ -0.31
HCFC1P51610 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.12□□□□□ -0.31
HCFC1P51610 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HCFC1P51610 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms