Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6CP48668 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.8□□□□□ -0.04
KRT6CP48668 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.8□□□□□ -0.04
KRT6CP48668 AC009477.1-201ENST00000452936 217 ntBASIC14.8□□□□□ -0.04
KRT6CP48668 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
KRT6CP48668 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
KRT6CP48668 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.8□□□□□ -0.04
KRT6CP48668 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 AL158212.4-201ENST00000624062 1286 ntBASIC14.8□□□□□ -0.04
KRT6CP48668 KRT18P28-201ENST00000453838 1332 ntBASIC14.8□□□□□ -0.04
KRT6CP48668 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6CP48668 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 AC026748.1-201ENST00000624349 3251 ntBASIC14.8□□□□□ -0.04
KRT6CP48668 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6CP48668 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6CP48668 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6CP48668 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KRT6CP48668 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KRT6CP48668 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
KRT6CP48668 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KRT6CP48668 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6CP48668 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.79□□□□□ -0.04
KRT6CP48668 TSSK5P-201ENST00000423978 907 ntBASIC14.79□□□□□ -0.04
KRT6CP48668 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
KRT6CP48668 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.79□□□□□ -0.04
KRT6CP48668 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6CP48668 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6CP48668 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6CP48668 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6CP48668 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms