Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.22■□□□□ 0.03
ARCN1P48444 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.22■□□□□ 0.03
ARCN1P48444 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.22■□□□□ 0.03
ARCN1P48444 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.22■□□□□ 0.03
ARCN1P48444 CTBP2P3-201ENST00000585629 1255 ntBASIC15.22■□□□□ 0.03
ARCN1P48444 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
ARCN1P48444 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.22■□□□□ 0.03
ARCN1P48444 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.22■□□□□ 0.03
ARCN1P48444 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.22■□□□□ 0.03
ARCN1P48444 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 AL391825.1-201ENST00000457671 1364 ntBASIC15.22■□□□□ 0.03
ARCN1P48444 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.22■□□□□ 0.03
ARCN1P48444 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
ARCN1P48444 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARCN1P48444 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.21■□□□□ 0.03
ARCN1P48444 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.21■□□□□ 0.03
ARCN1P48444 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.21■□□□□ 0.03
ARCN1P48444 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.21■□□□□ 0.03
ARCN1P48444 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.21■□□□□ 0.03
ARCN1P48444 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.21■□□□□ 0.03
ARCN1P48444 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.21■□□□□ 0.03
ARCN1P48444 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ARCN1P48444 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ARCN1P48444 AC120045.2-201ENST00000567334 178 ntBASIC15.21■□□□□ 0.03
ARCN1P48444 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.21■□□□□ 0.03
ARCN1P48444 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
ARCN1P48444 AC023090.2-201ENST00000625182 2110 ntBASIC15.21■□□□□ 0.03
ARCN1P48444 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
ARCN1P48444 AC005089.1-201ENST00000619486 2241 ntBASIC15.21■□□□□ 0.03
ARCN1P48444 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
ARCN1P48444 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARCN1P48444 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARCN1P48444 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ARCN1P48444 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.21■□□□□ 0.02
ARCN1P48444 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARCN1P48444 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARCN1P48444 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARCN1P48444 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARCN1P48444 INTS4P2-202ENST00000614726 2019 ntBASIC15.21■□□□□ 0.02
ARCN1P48444 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.21■□□□□ 0.02
ARCN1P48444 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARCN1P48444 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
ARCN1P48444 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.2■□□□□ 0.02
ARCN1P48444 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ARCN1P48444 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ARCN1P48444 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ARCN1P48444 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.2■□□□□ 0.02
ARCN1P48444 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.2■□□□□ 0.02
ARCN1P48444 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.2■□□□□ 0.02
ARCN1P48444 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.2■□□□□ 0.02
ARCN1P48444 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms