Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 AC099398.1-201ENST00000567919 2776 ntBASIC16.86■□□□□ 0.29
TM4SF4P48230 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.86■□□□□ 0.29
TM4SF4P48230 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TM4SF4P48230 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 ACTG1P19-201ENST00000418987 1116 ntBASIC16.86■□□□□ 0.29
TM4SF4P48230 OR51A9P-201ENST00000422578 911 ntBASIC16.86■□□□□ 0.29
TM4SF4P48230 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 GNG10P1-201ENST00000452289 199 ntBASIC16.86■□□□□ 0.29
TM4SF4P48230 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 AC083801.1-201ENST00000491689 358 ntBASIC16.86■□□□□ 0.29
TM4SF4P48230 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.86■□□□□ 0.29
TM4SF4P48230 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.86■□□□□ 0.29
TM4SF4P48230 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.86■□□□□ 0.29
TM4SF4P48230 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.86■□□□□ 0.29
TM4SF4P48230 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.86■□□□□ 0.29
TM4SF4P48230 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.86■□□□□ 0.29
TM4SF4P48230 AC023090.2-201ENST00000625182 2110 ntBASIC16.86■□□□□ 0.29
TM4SF4P48230 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.86■□□□□ 0.29
TM4SF4P48230 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM4SF4P48230 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TM4SF4P48230 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TM4SF4P48230 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 AC013726.1-201ENST00000563747 2285 ntBASIC16.85■□□□□ 0.29
TM4SF4P48230 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TM4SF4P48230 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.85■□□□□ 0.29
TM4SF4P48230 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.85■□□□□ 0.29
TM4SF4P48230 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TM4SF4P48230 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.85■□□□□ 0.29
TM4SF4P48230 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.85■□□□□ 0.29
TM4SF4P48230 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.85■□□□□ 0.29
TM4SF4P48230 AC106047.2-201ENST00000511723 743 ntBASIC16.85■□□□□ 0.29
TM4SF4P48230 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 RN7SL665P-201ENST00000578793 300 ntBASIC16.85■□□□□ 0.29
TM4SF4P48230 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 AC010632.2-201ENST00000588369 1224 ntBASIC16.85■□□□□ 0.29
TM4SF4P48230 AP005264.6-204ENST00000588436 719 ntBASIC16.85■□□□□ 0.29
TM4SF4P48230 CYP4F36P-201ENST00000589193 186 ntBASIC16.85■□□□□ 0.29
TM4SF4P48230 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.85■□□□□ 0.29
TM4SF4P48230 OR6D1P-202ENST00000641007 5290 ntBASIC16.85■□□□□ 0.29
TM4SF4P48230 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.85■□□□□ 0.29
TM4SF4P48230 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TM4SF4P48230 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 AC006372.4-201ENST00000624122 1543 ntBASIC16.85■□□□□ 0.29
TM4SF4P48230 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TM4SF4P48230 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms