Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP13P45452 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP13P45452 SLC7A15P-201ENST00000424028 1363 ntBASIC15.84■□□□□ 0.13
MMP13P45452 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
MMP13P45452 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP13P45452 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP13P45452 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
MMP13P45452 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
MMP13P45452 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP13P45452 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
MMP13P45452 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP13P45452 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.83■□□□□ 0.13
MMP13P45452 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP13P45452 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.83■□□□□ 0.13
MMP13P45452 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP13P45452 AC005252.3-201ENST00000623855 2258 ntBASIC15.83■□□□□ 0.13
MMP13P45452 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MMP13P45452 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP13P45452 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP13P45452 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.83■□□□□ 0.12
MMP13P45452 DFFBP1-201ENST00000433250 979 ntBASIC15.83■□□□□ 0.12
MMP13P45452 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.83■□□□□ 0.12
MMP13P45452 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.83■□□□□ 0.12
MMP13P45452 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 AL132655.2-201ENST00000596276 594 ntBASIC15.83■□□□□ 0.12
MMP13P45452 AC025181.2-201ENST00000606994 802 ntBASIC15.83■□□□□ 0.12
MMP13P45452 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
MMP13P45452 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MMP13P45452 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP13P45452 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP13P45452 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP13P45452 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.82■□□□□ 0.12
MMP13P45452 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP13P45452 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MMP13P45452 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP13P45452 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MMP13P45452 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP13P45452 MTHFR-210ENST00000641407 2387 ntBASIC15.82■□□□□ 0.12
MMP13P45452 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
MMP13P45452 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP13P45452 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 RN7SL399P-201ENST00000471648 279 ntBASIC15.82■□□□□ 0.12
MMP13P45452 FAM86LP-201ENST00000478302 853 ntBASIC15.82■□□□□ 0.12
MMP13P45452 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP13P45452 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP13P45452 RRP7BP-205ENST00000566851 833 ntBASIC15.82■□□□□ 0.12
MMP13P45452 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP13P45452 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP13P45452 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 AC007541.1-201ENST00000570282 1469 ntBASIC15.82■□□□□ 0.12
MMP13P45452 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MMP13P45452 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MMP13P45452 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MMP13P45452 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 AC015656.1-201ENST00000624209 3578 ntBASIC15.82■□□□□ 0.12
MMP13P45452 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP13P45452 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 REXO1L2P-201ENST00000425429 2069 ntBASIC15.82■□□□□ 0.12
MMP13P45452 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP13P45452 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms