Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.97■□□□□ 0.63
COL15A1P39059 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.97■□□□□ 0.63
COL15A1P39059 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.97■□□□□ 0.63
COL15A1P39059 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL15A1P39059 AP000845.1-201ENST00000581677 2131 ntBASIC18.97■□□□□ 0.63
COL15A1P39059 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 AC073352.2-201ENST00000609385 439 ntBASIC18.97■□□□□ 0.63
COL15A1P39059 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.97■□□□□ 0.63
COL15A1P39059 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 PPT1-215ENST00000641471 2368 ntBASIC18.97■□□□□ 0.63
COL15A1P39059 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.97■□□□□ 0.63
COL15A1P39059 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.97■□□□□ 0.63
COL15A1P39059 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL15A1P39059 AC138932.1-201ENST00000534164 6830 ntBASIC18.96■□□□□ 0.63
COL15A1P39059 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.96■□□□□ 0.63
COL15A1P39059 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.96■□□□□ 0.63
COL15A1P39059 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.96■□□□□ 0.63
COL15A1P39059 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.96■□□□□ 0.63
COL15A1P39059 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
COL15A1P39059 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL15A1P39059 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.96■□□□□ 0.63
COL15A1P39059 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.96■□□□□ 0.63
COL15A1P39059 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COL15A1P39059 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.96■□□□□ 0.63
COL15A1P39059 WASH3P-207ENST00000560956 1394 ntBASIC18.96■□□□□ 0.63
COL15A1P39059 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL15A1P39059 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.62
COL15A1P39059 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
COL15A1P39059 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL15A1P39059 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.95■□□□□ 0.62
COL15A1P39059 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 AC078875.1-201ENST00000431907 724 ntBASIC18.95■□□□□ 0.62
COL15A1P39059 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.95■□□□□ 0.62
COL15A1P39059 NOC2LP1-201ENST00000450578 752 ntBASIC18.95■□□□□ 0.62
COL15A1P39059 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.95■□□□□ 0.62
COL15A1P39059 SCARNA21-201ENST00000517026 139 ntBASIC18.95■□□□□ 0.62
COL15A1P39059 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COL15A1P39059 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.95■□□□□ 0.62
COL15A1P39059 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
COL15A1P39059 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.95■□□□□ 0.62
COL15A1P39059 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.95■□□□□ 0.62
COL15A1P39059 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.95■□□□□ 0.62
COL15A1P39059 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL15A1P39059 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.95■□□□□ 0.62
COL15A1P39059 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.95■□□□□ 0.62
COL15A1P39059 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.95■□□□□ 0.62
COL15A1P39059 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COL15A1P39059 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.95■□□□□ 0.62
COL15A1P39059 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.95■□□□□ 0.62
COL15A1P39059 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.95■□□□□ 0.62
COL15A1P39059 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.95■□□□□ 0.62
COL15A1P39059 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL15A1P39059 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.95■□□□□ 0.62
COL15A1P39059 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.95■□□□□ 0.62
COL15A1P39059 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL15A1P39059 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.94■□□□□ 0.62
COL15A1P39059 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.94■□□□□ 0.62
COL15A1P39059 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.94■□□□□ 0.62
COL15A1P39059 AC026316.1-201ENST00000398900 414 ntBASIC18.94■□□□□ 0.62
COL15A1P39059 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.94■□□□□ 0.62
COL15A1P39059 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.94■□□□□ 0.62
COL15A1P39059 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms