Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 AL603832.2-201ENST00000566195 2125 ntBASIC18.31■□□□□ 0.52
CHRNA5P30532 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNA5P30532 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 REXO1L2P-201ENST00000425429 2069 ntBASIC18.31■□□□□ 0.52
CHRNA5P30532 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.31■□□□□ 0.52
CHRNA5P30532 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.31■□□□□ 0.52
CHRNA5P30532 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.31■□□□□ 0.52
CHRNA5P30532 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.31■□□□□ 0.52
CHRNA5P30532 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.31■□□□□ 0.52
CHRNA5P30532 AP001527.2-201ENST00000614441 631 ntBASIC18.31■□□□□ 0.52
CHRNA5P30532 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA5P30532 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHRNA5P30532 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CHRNA5P30532 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHRNA5P30532 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHRNA5P30532 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA5P30532 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA5P30532 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA5P30532 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA5P30532 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA5P30532 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA5P30532 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNA5P30532 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNA5P30532 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA5P30532 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA5P30532 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 KRT18P36-201ENST00000411618 1276 ntBASIC18.3■□□□□ 0.52
CHRNA5P30532 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA5P30532 AL354861.1-201ENST00000445213 355 ntBASIC18.3■□□□□ 0.52
CHRNA5P30532 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA5P30532 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.3■□□□□ 0.52
CHRNA5P30532 AP000911.2-201ENST00000534330 502 ntBASIC18.3■□□□□ 0.52
CHRNA5P30532 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA5P30532 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.3■□□□□ 0.52
CHRNA5P30532 AC027237.1-201ENST00000560942 655 ntBASIC18.3■□□□□ 0.52
CHRNA5P30532 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA5P30532 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA5P30532 RN7SL470P-201ENST00000583069 259 ntBASIC18.3■□□□□ 0.52
CHRNA5P30532 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA5P30532 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA5P30532 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA5P30532 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA5P30532 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA5P30532 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA5P30532 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA5P30532 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA5P30532 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHRNA5P30532 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRNA5P30532 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.29■□□□□ 0.52
CHRNA5P30532 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.29■□□□□ 0.52
CHRNA5P30532 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.29■□□□□ 0.52
CHRNA5P30532 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRNA5P30532 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.29■□□□□ 0.52
CHRNA5P30532 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.29■□□□□ 0.52
CHRNA5P30532 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CHRNA5P30532 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.29■□□□□ 0.52
CHRNA5P30532 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.29■□□□□ 0.52
CHRNA5P30532 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.29■□□□□ 0.52
CHRNA5P30532 AC011247.3-201ENST00000603297 438 ntBASIC18.29■□□□□ 0.52
CHRNA5P30532 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHRNA5P30532 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.29■□□□□ 0.52
CHRNA5P30532 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHRNA5P30532 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms