Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.98□□□□□ -0.17
SHC1P29353 AP005018.1-201ENST00000525475 301 ntBASIC13.98□□□□□ -0.17
SHC1P29353 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.98□□□□□ -0.17
SHC1P29353 AC092552.1-201ENST00000547243 906 ntBASIC13.98□□□□□ -0.17
SHC1P29353 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.98□□□□□ -0.17
SHC1P29353 BRI3BPP1-201ENST00000594224 787 ntBASIC13.98□□□□□ -0.17
SHC1P29353 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.98□□□□□ -0.17
SHC1P29353 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.98□□□□□ -0.17
SHC1P29353 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.98□□□□□ -0.17
SHC1P29353 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SHC1P29353 CICP11-201ENST00000434745 2827 ntBASIC13.98□□□□□ -0.17
SHC1P29353 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SHC1P29353 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHC1P29353 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.98□□□□□ -0.17
SHC1P29353 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 AC097376.2-205ENST00000610159 5334 ntBASIC13.97□□□□□ -0.17
SHC1P29353 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SHC1P29353 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.97□□□□□ -0.17
SHC1P29353 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.97□□□□□ -0.17
SHC1P29353 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.97□□□□□ -0.17
SHC1P29353 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHC1P29353 AC104596.2-201ENST00000512793 793 ntBASIC13.97□□□□□ -0.17
SHC1P29353 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.97□□□□□ -0.17
SHC1P29353 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.97□□□□□ -0.17
SHC1P29353 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.97□□□□□ -0.17
SHC1P29353 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.97□□□□□ -0.17
SHC1P29353 AC025048.6-201ENST00000634326 1161 ntBASIC13.97□□□□□ -0.17
SHC1P29353 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHC1P29353 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.97□□□□□ -0.17
SHC1P29353 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.97□□□□□ -0.17
SHC1P29353 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SHC1P29353 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHC1P29353 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.97□□□□□ -0.17
SHC1P29353 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHC1P29353 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.96□□□□□ -0.17
SHC1P29353 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SHC1P29353 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SHC1P29353 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SHC1P29353 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SHC1P29353 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.96□□□□□ -0.17
SHC1P29353 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SHC1P29353 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms