Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.27□□□□□ -0.12
CHMP24386 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP24386 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.27□□□□□ -0.12
CHMP24386 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP24386 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP24386 SLC7A15P-201ENST00000424028 1363 ntBASIC14.27□□□□□ -0.12
CHMP24386 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CHMP24386 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP24386 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
CHMP24386 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CHMP24386 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP24386 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP24386 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP24386 RPL5P21-201ENST00000404620 815 ntBASIC14.27□□□□□ -0.13
CHMP24386 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.27□□□□□ -0.13
CHMP24386 GNAQP1-201ENST00000444815 1067 ntBASIC14.27□□□□□ -0.13
CHMP24386 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 AC055876.2-201ENST00000531834 546 ntBASIC14.27□□□□□ -0.13
CHMP24386 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP24386 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.27□□□□□ -0.13
CHMP24386 RRP7BP-205ENST00000566851 833 ntBASIC14.27□□□□□ -0.13
CHMP24386 AC099568.2-201ENST00000609194 695 ntBASIC14.27□□□□□ -0.13
CHMP24386 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CHMP24386 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHMP24386 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CHMP24386 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP24386 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CHMP24386 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP24386 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CHMP24386 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 AC063926.2-201ENST00000623766 1308 ntBASIC14.26□□□□□ -0.13
CHMP24386 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CHMP24386 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CHMP24386 TOMM22P5-201ENST00000416399 439 ntBASIC14.26□□□□□ -0.13
CHMP24386 AC074338.1-201ENST00000416825 156 ntBASIC14.26□□□□□ -0.13
CHMP24386 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.26□□□□□ -0.13
CHMP24386 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 SLED1-202ENST00000512051 380 ntBASIC14.26□□□□□ -0.13
CHMP24386 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.26□□□□□ -0.13
CHMP24386 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.26□□□□□ -0.13
CHMP24386 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.26□□□□□ -0.13
CHMP24386 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.26□□□□□ -0.13
CHMP24386 AC005225.4-201ENST00000557330 545 ntBASIC14.26□□□□□ -0.13
CHMP24386 LINC01115-203ENST00000606068 577 ntBASIC14.26□□□□□ -0.13
CHMP24386 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.26□□□□□ -0.13
CHMP24386 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.26□□□□□ -0.13
CHMP24386 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.26□□□□□ -0.13
CHMP24386 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CHMP24386 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CHMP24386 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP24386 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP24386 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CHMP24386 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP24386 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
CHMP24386 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
CHMP24386 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP24386 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.25□□□□□ -0.13
CHMP24386 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP24386 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms