Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
KCNA3P22001 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KCNA3P22001 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KCNA3P22001 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.25■□□□□ 0.51
KCNA3P22001 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNA3P22001 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
KCNA3P22001 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.24■□□□□ 0.51
KCNA3P22001 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
KCNA3P22001 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KCNA3P22001 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
KCNA3P22001 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.24■□□□□ 0.51
KCNA3P22001 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.24■□□□□ 0.51
KCNA3P22001 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC18.24■□□□□ 0.51
KCNA3P22001 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.24■□□□□ 0.51
KCNA3P22001 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.24■□□□□ 0.51
KCNA3P22001 AC007952.4-201ENST00000573866 637 ntBASIC18.24■□□□□ 0.51
KCNA3P22001 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.24■□□□□ 0.51
KCNA3P22001 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.24■□□□□ 0.51
KCNA3P22001 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KCNA3P22001 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
KCNA3P22001 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.24■□□□□ 0.51
KCNA3P22001 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KCNA3P22001 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 TMBIM7P-202ENST00000641474 1516 ntBASIC18.23■□□□□ 0.51
KCNA3P22001 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.23■□□□□ 0.51
KCNA3P22001 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.23■□□□□ 0.51
KCNA3P22001 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.23■□□□□ 0.51
KCNA3P22001 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 DPY19L2P5-201ENST00000456300 331 ntBASIC18.23■□□□□ 0.51
KCNA3P22001 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.23■□□□□ 0.51
KCNA3P22001 MIR4472-1-201ENST00000584349 80 ntBASIC18.23■□□□□ 0.51
KCNA3P22001 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.23■□□□□ 0.51
KCNA3P22001 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.23■□□□□ 0.51
KCNA3P22001 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
KCNA3P22001 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KCNA3P22001 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.23■□□□□ 0.51
KCNA3P22001 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KCNA3P22001 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
KCNA3P22001 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KCNA3P22001 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.22■□□□□ 0.51
KCNA3P22001 AL662844.4-201ENST00000606367 2838 ntBASIC18.22■□□□□ 0.51
KCNA3P22001 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
KCNA3P22001 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KCNA3P22001 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.22■□□□□ 0.51
KCNA3P22001 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNA3P22001 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KCNA3P22001 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms