Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.89□□□□□ -0.19
CD53P19397 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CD53P19397 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.89□□□□□ -0.19
CD53P19397 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.89□□□□□ -0.19
CD53P19397 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.89□□□□□ -0.19
CD53P19397 SRD5A3P1-201ENST00000603021 949 ntBASIC13.89□□□□□ -0.19
CD53P19397 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD53P19397 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
CD53P19397 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CD53P19397 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CD53P19397 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CD53P19397 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.88□□□□□ -0.19
CD53P19397 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.88□□□□□ -0.19
CD53P19397 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 CICP14-201ENST00000629111 2732 ntBASIC13.88□□□□□ -0.19
CD53P19397 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.88□□□□□ -0.19
CD53P19397 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CD53P19397 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.88□□□□□ -0.19
CD53P19397 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CD53P19397 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.88□□□□□ -0.19
CD53P19397 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 MEP1AP4-201ENST00000423244 1087 ntBASIC13.88□□□□□ -0.19
CD53P19397 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 TTTY23B-201ENST00000442790 549 ntBASIC13.88□□□□□ -0.19
CD53P19397 EEF1DP4-201ENST00000446006 880 ntBASIC13.88□□□□□ -0.19
CD53P19397 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.88□□□□□ -0.19
CD53P19397 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.88□□□□□ -0.19
CD53P19397 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.88□□□□□ -0.19
CD53P19397 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.88□□□□□ -0.19
CD53P19397 AL033527.5-202ENST00000641632 1098 ntBASIC13.88□□□□□ -0.19
CD53P19397 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.88□□□□□ -0.19
CD53P19397 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CD53P19397 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CD53P19397 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD53P19397 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD53P19397 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD53P19397 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.87□□□□□ -0.19
CD53P19397 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms