Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 REXO1L4P-201ENST00000605109 1937 ntBASIC13.4□□□□□ -0.26
ATF1P18846 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.4□□□□□ -0.26
ATF1P18846 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
ATF1P18846 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.4□□□□□ -0.26
ATF1P18846 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ATF1P18846 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATF1P18846 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.4□□□□□ -0.26
ATF1P18846 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
ATF1P18846 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.4□□□□□ -0.27
ATF1P18846 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ATF1P18846 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 AC074338.1-201ENST00000416825 156 ntBASIC13.39□□□□□ -0.27
ATF1P18846 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.39□□□□□ -0.27
ATF1P18846 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.39□□□□□ -0.27
ATF1P18846 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.39□□□□□ -0.27
ATF1P18846 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.39□□□□□ -0.27
ATF1P18846 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.39□□□□□ -0.27
ATF1P18846 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.39□□□□□ -0.27
ATF1P18846 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 AC010327.4-202ENST00000591484 748 ntBASIC13.39□□□□□ -0.27
ATF1P18846 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.39□□□□□ -0.27
ATF1P18846 AP001059.3-201ENST00000619053 235 ntBASIC13.39□□□□□ -0.27
ATF1P18846 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ATF1P18846 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ATF1P18846 CETN4P-206ENST00000642099 2168 ntBASIC13.39□□□□□ -0.27
ATF1P18846 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ATF1P18846 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.39□□□□□ -0.27
ATF1P18846 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 AC007326.2-201ENST00000624224 7579 ntBASIC13.39□□□□□ -0.27
ATF1P18846 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.39□□□□□ -0.27
ATF1P18846 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ATF1P18846 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATF1P18846 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATF1P18846 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms