Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 TERF1P1-201ENST00000311003 1181 ntBASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 MIR4515-201ENST00000584082 81 ntBASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 OR13I1P-201ENST00000609811 1264 ntBASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 AP006294.2-201ENST00000641667 209 ntBASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 AC018442.1-201ENST00000421439 2061 ntBASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.33□□□□□ -0.44
H2AFB1P0C5Y9 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 DRAXINP1-201ENST00000437611 948 ntBASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 TOB2P1-201ENST00000469761 992 ntBASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 KRT18P34-201ENST00000488218 1270 ntBASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2AFB1P0C5Y9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2AFB1P0C5Y9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2AFB1P0C5Y9 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms