Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM1P09493 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM1P09493 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TPM1P09493 AL133267.1-201ENST00000398220 340 ntBASIC16.82■□□□□ 0.28
TPM1P09493 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.82■□□□□ 0.28
TPM1P09493 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM1P09493 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM1P09493 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.82■□□□□ 0.28
TPM1P09493 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM1P09493 ALG1L8P-201ENST00000533887 760 ntBASIC16.82■□□□□ 0.28
TPM1P09493 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM1P09493 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM1P09493 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM1P09493 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.82■□□□□ 0.28
TPM1P09493 AC003101.2-201ENST00000612557 442 ntBASIC16.82■□□□□ 0.28
TPM1P09493 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.82■□□□□ 0.28
TPM1P09493 AL645728.2-202ENST00000641679 227 ntBASIC16.82■□□□□ 0.28
TPM1P09493 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TPM1P09493 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 AC018529.2-202ENST00000611482 3087 ntBASIC16.82■□□□□ 0.28
TPM1P09493 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TPM1P09493 LINC01230-201ENST00000625222 3017 ntBASIC16.82■□□□□ 0.28
TPM1P09493 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 AC079781.5-202ENST00000641784 3743 ntBASIC16.82■□□□□ 0.28
TPM1P09493 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TPM1P09493 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.82■□□□□ 0.28
TPM1P09493 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM1P09493 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM1P09493 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM1P09493 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM1P09493 AC007787.1-201ENST00000588095 1583 ntBASIC16.81■□□□□ 0.28
TPM1P09493 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
TPM1P09493 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM1P09493 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM1P09493 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TPM1P09493 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
TPM1P09493 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TPM1P09493 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TPM1P09493 REXO1L4P-201ENST00000605109 1937 ntBASIC16.81■□□□□ 0.28
TPM1P09493 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TPM1P09493 AC005237.2-201ENST00000434368 219 ntBASIC16.81■□□□□ 0.28
TPM1P09493 HIST3H2BA-201ENST00000436555 524 ntBASIC16.81■□□□□ 0.28
TPM1P09493 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM1P09493 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM1P09493 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM1P09493 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM1P09493 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM1P09493 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.81■□□□□ 0.28
TPM1P09493 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
TPM1P09493 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPM1P09493 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.81■□□□□ 0.28
TPM1P09493 AC018442.1-201ENST00000421439 2061 ntBASIC16.81■□□□□ 0.28
TPM1P09493 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM1P09493 AL928921.2-201ENST00000641325 2442 ntBASIC16.8■□□□□ 0.28
TPM1P09493 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM1P09493 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM1P09493 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 KRT8P12-202ENST00000472924 1397 ntBASIC16.8■□□□□ 0.28
TPM1P09493 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TPM1P09493 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPM1P09493 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TPM1P09493 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM1P09493 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPM1P09493 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.8■□□□□ 0.28
TPM1P09493 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM1P09493 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.8■□□□□ 0.28
TPM1P09493 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms