Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.43■□□□□ 0.7
COL5A2P05997 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.43■□□□□ 0.7
COL5A2P05997 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.43■□□□□ 0.7
COL5A2P05997 MROH4P-201ENST00000431302 1578 ntBASIC19.43■□□□□ 0.7
COL5A2P05997 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC19.43■□□□□ 0.7
COL5A2P05997 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.43■□□□□ 0.7
COL5A2P05997 AC084752.1-201ENST00000509766 622 ntBASIC19.43■□□□□ 0.7
COL5A2P05997 RNA5SP417-201ENST00000516459 108 ntBASIC19.43■□□□□ 0.7
COL5A2P05997 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC19.43■□□□□ 0.7
COL5A2P05997 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COL5A2P05997 AC073592.2-201ENST00000623062 780 ntBASIC19.43■□□□□ 0.7
COL5A2P05997 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COL5A2P05997 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.43■□□□□ 0.7
COL5A2P05997 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.43■□□□□ 0.7
COL5A2P05997 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL5A2P05997 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC19.43■□□□□ 0.7
COL5A2P05997 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.42■□□□□ 0.7
COL5A2P05997 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 NHP2-202ENST00000314397 599 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 KRT17P5-201ENST00000332088 839 ntBASIC19.42■□□□□ 0.7
COL5A2P05997 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.42■□□□□ 0.7
COL5A2P05997 RN7SKP109-201ENST00000410592 316 ntBASIC19.42■□□□□ 0.7
COL5A2P05997 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.42■□□□□ 0.7
COL5A2P05997 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.42■□□□□ 0.7
COL5A2P05997 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.42■□□□□ 0.7
COL5A2P05997 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.42■□□□□ 0.7
COL5A2P05997 MIR2392-201ENST00000584881 84 ntBASIC19.42■□□□□ 0.7
COL5A2P05997 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.42■□□□□ 0.7
COL5A2P05997 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COL5A2P05997 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.42■□□□□ 0.7
COL5A2P05997 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
COL5A2P05997 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.42■□□□□ 0.7
COL5A2P05997 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL5A2P05997 MIR645-201ENST00000385283 94 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.41■□□□□ 0.7
COL5A2P05997 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.41■□□□□ 0.7
COL5A2P05997 AC024293.1-201ENST00000467930 498 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 RN7SL530P-201ENST00000485097 298 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 AREG-202ENST00000502307 956 ntTSL 5 BASIC19.41■□□□□ 0.7
COL5A2P05997 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COL5A2P05997 AC093909.3-201ENST00000504783 336 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 AC009093.10-201ENST00000641956 1442 ntBASIC19.41■□□□□ 0.7
COL5A2P05997 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.41■□□□□ 0.7
COL5A2P05997 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.41■□□□□ 0.7
COL5A2P05997 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
COL5A2P05997 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.41■□□□□ 0.7
COL5A2P05997 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL5A2P05997 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL5A2P05997 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms