Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 AC139749.1-202ENST00000617529 3139 ntBASIC16.05■□□□□ 0.16
RTN3O95197 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RTN3O95197 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN3O95197 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.05■□□□□ 0.16
RTN3O95197 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.05■□□□□ 0.16
RTN3O95197 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.05■□□□□ 0.16
RTN3O95197 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.05■□□□□ 0.16
RTN3O95197 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.05■□□□□ 0.16
RTN3O95197 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.05■□□□□ 0.16
RTN3O95197 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RTN3O95197 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN3O95197 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.05■□□□□ 0.16
RTN3O95197 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 FLJ16779-201ENST00000612722 7638 ntBASIC16.05■□□□□ 0.16
RTN3O95197 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN3O95197 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.04■□□□□ 0.16
RTN3O95197 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.04■□□□□ 0.16
RTN3O95197 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.04■□□□□ 0.16
RTN3O95197 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RTN3O95197 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.04■□□□□ 0.16
RTN3O95197 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.04■□□□□ 0.16
RTN3O95197 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.04■□□□□ 0.16
RTN3O95197 AC022616.1-201ENST00000518688 554 ntBASIC16.04■□□□□ 0.16
RTN3O95197 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
RTN3O95197 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.04■□□□□ 0.16
RTN3O95197 RN7SL48P-201ENST00000579283 293 ntBASIC16.04■□□□□ 0.16
RTN3O95197 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.04■□□□□ 0.16
RTN3O95197 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 TMBIM7P-203ENST00000641617 1718 ntBASIC16.04■□□□□ 0.16
RTN3O95197 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.04■□□□□ 0.16
RTN3O95197 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 AP002414.2-201ENST00000591780 3365 ntBASIC16.04■□□□□ 0.16
RTN3O95197 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RTN3O95197 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN3O95197 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
RTN3O95197 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RTN3O95197 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RTN3O95197 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RTN3O95197 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN3O95197 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RTN3O95197 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.03■□□□□ 0.16
RTN3O95197 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
RTN3O95197 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms