Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ALX3O95076 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ALX3O95076 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ALX3O95076 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 SPDYE17-201ENST00000412399 783 ntBASIC13.55□□□□□ -0.24
ALX3O95076 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.55□□□□□ -0.24
ALX3O95076 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.55□□□□□ -0.24
ALX3O95076 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.55□□□□□ -0.24
ALX3O95076 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.55□□□□□ -0.24
ALX3O95076 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.55□□□□□ -0.24
ALX3O95076 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.55□□□□□ -0.24
ALX3O95076 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ALX3O95076 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ALX3O95076 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALX3O95076 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ALX3O95076 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ALX3O95076 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ALX3O95076 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ALX3O95076 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.54□□□□□ -0.24
ALX3O95076 AL592309.1-201ENST00000443127 649 ntBASIC13.54□□□□□ -0.24
ALX3O95076 AC069335.1-201ENST00000489972 472 ntBASIC13.54□□□□□ -0.24
ALX3O95076 SLC25A39P2-201ENST00000537614 270 ntBASIC13.54□□□□□ -0.24
ALX3O95076 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ALX3O95076 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC13.54□□□□□ -0.24
ALX3O95076 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ALX3O95076 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ALX3O95076 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ALX3O95076 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ALX3O95076 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.54□□□□□ -0.24
ALX3O95076 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.54□□□□□ -0.24
ALX3O95076 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.54□□□□□ -0.24
ALX3O95076 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALX3O95076 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms