Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
UPK1BO75841 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
UPK1BO75841 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.25□□□□□ -0.29
UPK1BO75841 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK1BO75841 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK1BO75841 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
UPK1BO75841 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UPK1BO75841 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 AL022323.5-201ENST00000624101 2059 ntBASIC13.24□□□□□ -0.29
UPK1BO75841 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK1BO75841 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
UPK1BO75841 POM121L3P-201ENST00000419331 1163 ntBASIC13.24□□□□□ -0.29
UPK1BO75841 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.24□□□□□ -0.29
UPK1BO75841 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 NKAPP1-205ENST00000585790 367 ntBASIC13.24□□□□□ -0.29
UPK1BO75841 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
UPK1BO75841 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.24□□□□□ -0.29
UPK1BO75841 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
UPK1BO75841 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
UPK1BO75841 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK1BO75841 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK1BO75841 POM121L14P-201ENST00000406100 1558 ntBASIC13.24□□□□□ -0.29
UPK1BO75841 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK1BO75841 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK1BO75841 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK1BO75841 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.23□□□□□ -0.29
UPK1BO75841 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.23□□□□□ -0.29
UPK1BO75841 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
UPK1BO75841 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
UPK1BO75841 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK1BO75841 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.23□□□□□ -0.29
UPK1BO75841 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 BX664615.1-201ENST00000443558 458 ntBASIC13.23□□□□□ -0.29
UPK1BO75841 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UPK1BO75841 TSPY15P-201ENST00000457163 923 ntBASIC13.23□□□□□ -0.29
UPK1BO75841 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.23□□□□□ -0.29
UPK1BO75841 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms