Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CXCL13O43927 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CXCL13O43927 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCL13O43927 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCL13O43927 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 ANKRD19P-201ENST00000338192 862 ntBASIC13.6□□□□□ -0.23
CXCL13O43927 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CXCL13O43927 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CXCL13O43927 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CXCL13O43927 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.6□□□□□ -0.23
CXCL13O43927 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 KRT90P-201ENST00000549264 1064 ntBASIC13.6□□□□□ -0.23
CXCL13O43927 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.6□□□□□ -0.23
CXCL13O43927 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 AC023157.3-201ENST00000619086 2088 ntBASIC13.6□□□□□ -0.23
CXCL13O43927 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CXCL13O43927 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCL13O43927 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCL13O43927 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 LILRP1-201ENST00000444199 1370 ntBASIC13.59□□□□□ -0.23
CXCL13O43927 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 AC144831.1-201ENST00000573312 2656 ntBASIC13.59□□□□□ -0.23
CXCL13O43927 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 FAM197Y7-201ENST00000432892 766 ntBASIC13.59□□□□□ -0.23
CXCL13O43927 RPL7P3-201ENST00000441388 714 ntBASIC13.59□□□□□ -0.23
CXCL13O43927 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.59□□□□□ -0.23
CXCL13O43927 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.59□□□□□ -0.23
CXCL13O43927 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCL13O43927 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.59□□□□□ -0.23
CXCL13O43927 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCL13O43927 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.59□□□□□ -0.23
CXCL13O43927 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.59□□□□□ -0.23
CXCL13O43927 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 AC133552.6-201ENST00000613406 534 ntBASIC13.59□□□□□ -0.23
CXCL13O43927 MIR6805-201ENST00000615055 62 ntBASIC13.59□□□□□ -0.23
CXCL13O43927 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCL13O43927 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms