Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6DO43924 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6DO43924 AL023775.1-201ENST00000454907 1746 ntBASIC11.83□□□□□ -0.52
PDE6DO43924 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6DO43924 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PDE6DO43924 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.83□□□□□ -0.52
PDE6DO43924 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6DO43924 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
PDE6DO43924 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PDE6DO43924 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
PDE6DO43924 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6DO43924 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6DO43924 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.83□□□□□ -0.52
PDE6DO43924 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.83□□□□□ -0.52
PDE6DO43924 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PDE6DO43924 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
PDE6DO43924 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PDE6DO43924 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
PDE6DO43924 PCDHA5-203ENST00000614258 4248 ntBASIC11.82□□□□□ -0.52
PDE6DO43924 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.82□□□□□ -0.52
PDE6DO43924 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.82□□□□□ -0.52
PDE6DO43924 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.82□□□□□ -0.52
PDE6DO43924 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.82□□□□□ -0.52
PDE6DO43924 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PDE6DO43924 OR7E14P-202ENST00000530490 1290 ntBASIC11.82□□□□□ -0.52
PDE6DO43924 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.82□□□□□ -0.52
PDE6DO43924 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.82□□□□□ -0.52
PDE6DO43924 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.82□□□□□ -0.52
PDE6DO43924 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 AL356488.2-201ENST00000602755 427 ntBASIC11.82□□□□□ -0.52
PDE6DO43924 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.82□□□□□ -0.52
PDE6DO43924 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.82□□□□□ -0.52
PDE6DO43924 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PDE6DO43924 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.82□□□□□ -0.52
PDE6DO43924 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.82□□□□□ -0.52
PDE6DO43924 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PDE6DO43924 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PDE6DO43924 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
PDE6DO43924 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.81□□□□□ -0.52
PDE6DO43924 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
PDE6DO43924 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 MIR193BHG-211ENST00000641433 5365 ntBASIC11.81□□□□□ -0.52
PDE6DO43924 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.81□□□□□ -0.52
PDE6DO43924 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PDE6DO43924 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.81□□□□□ -0.52
PDE6DO43924 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.81□□□□□ -0.52
PDE6DO43924 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms