Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNQ3O43525 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNQ3O43525 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNQ3O43525 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 SALL4P5-201ENST00000419001 1760 ntBASIC19.24■□□□□ 0.67
KCNQ3O43525 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ3O43525 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ3O43525 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ3O43525 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ3O43525 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KCNQ3O43525 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.24■□□□□ 0.67
KCNQ3O43525 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.24■□□□□ 0.67
KCNQ3O43525 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNQ3O43525 UPF3AP2-201ENST00000457924 1132 ntBASIC19.24■□□□□ 0.67
KCNQ3O43525 TUBB8P8-201ENST00000458717 1058 ntBASIC19.24■□□□□ 0.67
KCNQ3O43525 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ3O43525 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNQ3O43525 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNQ3O43525 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
KCNQ3O43525 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNQ3O43525 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.24■□□□□ 0.67
KCNQ3O43525 AC090164.2-201ENST00000611487 516 ntBASIC19.24■□□□□ 0.67
KCNQ3O43525 Z98259.2-201ENST00000641583 609 ntBASIC19.24■□□□□ 0.67
KCNQ3O43525 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ3O43525 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
KCNQ3O43525 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
KCNQ3O43525 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KCNQ3O43525 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNQ3O43525 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
KCNQ3O43525 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNQ3O43525 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNQ3O43525 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 AC136759.1-202ENST00000530858 2194 ntBASIC19.23■□□□□ 0.67
KCNQ3O43525 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 AC007292.2-201ENST00000593524 1812 ntBASIC19.23■□□□□ 0.67
KCNQ3O43525 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
KCNQ3O43525 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.23■□□□□ 0.67
KCNQ3O43525 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 RN7SL11P-201ENST00000471305 293 ntBASIC19.23■□□□□ 0.67
KCNQ3O43525 HLA-J-204ENST00000495278 958 ntBASIC19.23■□□□□ 0.67
KCNQ3O43525 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNQ3O43525 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.23■□□□□ 0.67
KCNQ3O43525 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.23■□□□□ 0.67
KCNQ3O43525 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNQ3O43525 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNQ3O43525 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNQ3O43525 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNQ3O43525 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.23■□□□□ 0.67
KCNQ3O43525 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
KCNQ3O43525 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 CICP23-201ENST00000605013 2741 ntBASIC19.23■□□□□ 0.67
KCNQ3O43525 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ3O43525 ACE3P-201ENST00000423435 1973 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms