Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC21.53■■□□□ 1.04
MSH5O43196 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC21.53■■□□□ 1.04
MSH5O43196 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC21.53■■□□□ 1.04
MSH5O43196 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MSH5O43196 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MSH5O43196 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.52■■□□□ 1.04
MSH5O43196 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.52■■□□□ 1.04
MSH5O43196 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC21.52■■□□□ 1.04
MSH5O43196 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.52■■□□□ 1.04
MSH5O43196 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.52■■□□□ 1.04
MSH5O43196 ZNF736P5Y-201ENST00000451173 805 ntBASIC21.52■■□□□ 1.04
MSH5O43196 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.52■■□□□ 1.04
MSH5O43196 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 GIMAP3P-201ENST00000495150 836 ntBASIC21.52■■□□□ 1.04
MSH5O43196 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.52■■□□□ 1.04
MSH5O43196 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC21.52■■□□□ 1.04
MSH5O43196 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC21.52■■□□□ 1.04
MSH5O43196 PIGPP4-201ENST00000584447 307 ntBASIC21.52■■□□□ 1.04
MSH5O43196 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 AL132655.2-201ENST00000596276 594 ntBASIC21.52■■□□□ 1.04
MSH5O43196 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 AC004492.1-201ENST00000607036 742 ntBASIC21.52■■□□□ 1.04
MSH5O43196 AL138828.2-201ENST00000615812 383 ntBASIC21.52■■□□□ 1.04
MSH5O43196 AC068787.1-201ENST00000623908 691 ntBASIC21.52■■□□□ 1.04
MSH5O43196 BANP-203ENST00000393207 2438 ntTSL 2 BASIC21.52■■□□□ 1.04
MSH5O43196 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.52■■□□□ 1.04
MSH5O43196 RPL31P11-201ENST00000426558 1558 ntBASIC21.52■■□□□ 1.04
MSH5O43196 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSH5O43196 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.52■■□□□ 1.03
MSH5O43196 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MSH5O43196 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.52■■□□□ 1.03
MSH5O43196 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.52■■□□□ 1.03
MSH5O43196 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.52■■□□□ 1.03
MSH5O43196 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
MSH5O43196 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 MIR346-201ENST00000362234 95 ntBASIC21.51■■□□□ 1.03
MSH5O43196 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 SKINT1L-201ENST00000401057 817 ntBASIC21.51■■□□□ 1.03
MSH5O43196 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC21.51■■□□□ 1.03
MSH5O43196 BMP6P1-201ENST00000431230 679 ntBASIC21.51■■□□□ 1.03
MSH5O43196 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.51■■□□□ 1.03
MSH5O43196 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.51■■□□□ 1.03
MSH5O43196 MTND5P5-201ENST00000503764 376 ntBASIC21.51■■□□□ 1.03
MSH5O43196 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.51■■□□□ 1.03
MSH5O43196 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC21.51■■□□□ 1.03
MSH5O43196 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC21.51■■□□□ 1.03
MSH5O43196 MTCYBP41-201ENST00000528913 1123 ntBASIC21.51■■□□□ 1.03
MSH5O43196 AC109635.5-201ENST00000533593 962 ntBASIC21.51■■□□□ 1.03
MSH5O43196 EMSY-217ENST00000533988 934 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 AL356800.1-201ENST00000553339 735 ntBASIC21.51■■□□□ 1.03
MSH5O43196 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.51■■□□□ 1.03
MSH5O43196 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.51■■□□□ 1.03
MSH5O43196 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.51■■□□□ 1.03
MSH5O43196 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 AC098483.2-201ENST00000603158 454 ntBASIC21.51■■□□□ 1.03
MSH5O43196 BX255925.2-201ENST00000605600 515 ntBASIC21.51■■□□□ 1.03
MSH5O43196 AC087072.2-201ENST00000621060 682 ntBASIC21.51■■□□□ 1.03
MSH5O43196 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
MSH5O43196 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.51■■□□□ 1.03
MSH5O43196 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.51■■□□□ 1.03
MSH5O43196 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.51■■□□□ 1.03
MSH5O43196 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSH5O43196 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC21.5■■□□□ 1.03
MSH5O43196 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.5■■□□□ 1.03
MSH5O43196 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSH5O43196 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC21.5■■□□□ 1.03
MSH5O43196 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC21.5■■□□□ 1.03
MSH5O43196 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC21.5■■□□□ 1.03
MSH5O43196 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms