Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHL1O00533 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHL1O00533 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHL1O00533 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.31■□□□□ 0.68
CHL1O00533 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CHL1O00533 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHL1O00533 AC104306.2-201ENST00000451877 341 ntBASIC19.31■□□□□ 0.68
CHL1O00533 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.31■□□□□ 0.68
CHL1O00533 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CHL1O00533 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CHL1O00533 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.31■□□□□ 0.68
CHL1O00533 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.31■□□□□ 0.68
CHL1O00533 MIR4525-201ENST00000580000 75 ntBASIC19.31■□□□□ 0.68
CHL1O00533 AC008825.2-201ENST00000603374 718 ntBASIC19.31■□□□□ 0.68
CHL1O00533 AL136301.1-201ENST00000615830 422 ntBASIC19.31■□□□□ 0.68
CHL1O00533 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.31■□□□□ 0.68
CHL1O00533 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHL1O00533 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.31■□□□□ 0.68
CHL1O00533 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.31■□□□□ 0.68
CHL1O00533 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHL1O00533 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHL1O00533 SHC1P1-201ENST00000425230 1745 ntBASIC19.31■□□□□ 0.68
CHL1O00533 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHL1O00533 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 AC013726.1-201ENST00000563747 2285 ntBASIC19.3■□□□□ 0.68
CHL1O00533 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 POM121L10P-201ENST00000436994 1285 ntBASIC19.3■□□□□ 0.68
CHL1O00533 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 AC005730.2-201ENST00000564549 1184 ntBASIC19.3■□□□□ 0.68
CHL1O00533 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.3■□□□□ 0.68
CHL1O00533 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 AL118558.3-201ENST00000607414 1079 ntBASIC19.3■□□□□ 0.68
CHL1O00533 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.3■□□□□ 0.68
CHL1O00533 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.3■□□□□ 0.68
CHL1O00533 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHL1O00533 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHL1O00533 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.29■□□□□ 0.68
CHL1O00533 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.29■□□□□ 0.68
CHL1O00533 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHL1O00533 AC006033.1-201ENST00000440505 426 ntBASIC19.29■□□□□ 0.68
CHL1O00533 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.29■□□□□ 0.68
CHL1O00533 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.29■□□□□ 0.68
CHL1O00533 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.29■□□□□ 0.68
CHL1O00533 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.29■□□□□ 0.68
CHL1O00533 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CHL1O00533 AL162426.1-201ENST00000624141 743 ntBASIC19.29■□□□□ 0.68
CHL1O00533 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.29■□□□□ 0.68
CHL1O00533 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.29■□□□□ 0.68
CHL1O00533 AC006058.4-201ENST00000624016 1670 ntBASIC19.29■□□□□ 0.68
CHL1O00533 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.29■□□□□ 0.68
CHL1O00533 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms