Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 INE2-201ENST00000630399 1874 ntBASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC012508.2-201ENST00000567613 1472 ntBASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC9.66□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC233702.3-201ENST00000578656 1387 ntBASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 GCSHP5-201ENST00000443090 522 ntBASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 KRT18P38-201ENST00000449496 1282 ntBASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 MIR4651-201ENST00000582622 73 ntBASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC004706.3-202ENST00000621574 984 ntBASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC007787.1-201ENST00000588095 1583 ntBASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 AP005117.1-201ENST00000584346 1413 ntBASIC9.65□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 AC114271.1-201ENST00000612689 2813 ntBASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TMEM256-PLSCR3K7ERE1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms