Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.23□□□□□ -0.61
NACAE9PAV3 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
NACAE9PAV3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.23□□□□□ -0.61
NACAE9PAV3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.23□□□□□ -0.61
NACAE9PAV3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
NACAE9PAV3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.23□□□□□ -0.61
NACAE9PAV3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.23□□□□□ -0.61
NACAE9PAV3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.23□□□□□ -0.61
NACAE9PAV3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.23□□□□□ -0.61
NACAE9PAV3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.23□□□□□ -0.61
NACAE9PAV3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
NACAE9PAV3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 AL607033.1-201ENST00000623900 1599 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 AC015922.1-201ENST00000421102 1152 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
NACAE9PAV3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.23□□□□□ -0.61
NACAE9PAV3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.23□□□□□ -0.61
NACAE9PAV3 AC005225.4-201ENST00000557330 545 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 MIR4745-201ENST00000577608 62 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 AC239800.4-201ENST00000603712 296 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 AC004790.1-201ENST00000612686 536 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 AC018529.1-201ENST00000613063 361 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.23□□□□□ -0.61
NACAE9PAV3 AC025048.6-201ENST00000634326 1161 ntBASIC11.23□□□□□ -0.61
NACAE9PAV3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.23□□□□□ -0.61
NACAE9PAV3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NACAE9PAV3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.23□□□□□ -0.61
NACAE9PAV3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 MEX3B-202ENST00000558133 4333 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.22□□□□□ -0.61
NACAE9PAV3 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 RN7SL692P-201ENST00000464677 288 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 AC010336.2-201ENST00000564226 506 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 LINC01115-203ENST00000606068 577 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 AC026979.3-201ENST00000607315 403 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NACAE9PAV3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
NACAE9PAV3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.22□□□□□ -0.61
NACAE9PAV3 AC148477.4-201ENST00000613430 1793 ntBASIC11.22□□□□□ -0.61
NACAE9PAV3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms