Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.65□□□□□ -0.22
TVP23AA6NH52 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TVP23AA6NH52 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TVP23AA6NH52 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TVP23AA6NH52 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TVP23AA6NH52 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
TVP23AA6NH52 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 AC138969.3-201ENST00000546612 1459 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 AC138932.2-201ENST00000548268 1459 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 AC126755.4-201ENST00000549796 1459 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 AC107890.1-201ENST00000422478 521 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 AC025678.2-201ENST00000562061 970 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 AL691403.2-201ENST00000618460 490 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TVP23AA6NH52 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TVP23AA6NH52 LINC01230-201ENST00000625222 3017 ntBASIC13.64□□□□□ -0.23
TVP23AA6NH52 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 MIR1233-2-201ENST00000408138 82 ntBASIC13.63□□□□□ -0.23
TVP23AA6NH52 MIR1233-1-201ENST00000408722 82 ntBASIC13.63□□□□□ -0.23
TVP23AA6NH52 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 TREML5P-201ENST00000421694 576 ntBASIC13.63□□□□□ -0.23
TVP23AA6NH52 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 AC092580.3-201ENST00000430932 139 ntBASIC13.63□□□□□ -0.23
TVP23AA6NH52 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 AC140878.1-201ENST00000565277 250 ntBASIC13.63□□□□□ -0.23
TVP23AA6NH52 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms