Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 RN7SL574P-201ENST00000581512 297 ntBASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 AC005962.1-201ENST00000584100 773 ntBASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 AL132994.2-201ENST00000603120 687 ntBASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 AC097724.1-201ENST00000609581 426 ntBASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 AL136295.7-201ENST00000619226 1200 ntBASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 AL805961.1-203ENST00000641078 1258 ntBASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC144AA2RUR9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC144AA2RUR9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
CCDC144AA2RUR9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 FAM90A7P-201ENST00000382628 1395 ntBASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 FAM90A23P-201ENST00000400136 1395 ntBASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 UPF3AP2-201ENST00000457924 1132 ntBASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 AC013726.1-201ENST00000563747 2285 ntBASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC144AA2RUR9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AL157407.1-201ENST00000435784 904 ntBASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AL596276.2-201ENST00000447525 331 ntBASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 RCC2P8-201ENST00000502779 1035 ntBASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AC079328.1-201ENST00000560358 952 ntBASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 SNORD3B-2-202ENST00000571722 791 ntBASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 CICP6-201ENST00000457191 2729 ntBASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC144AA2RUR9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 IMP3P2-201ENST00000489760 475 ntBASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 AL590440.2-201ENST00000641973 1595 ntBASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 LINC01101-201ENST00000622953 1884 ntBASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms