Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 LINC01101-201ENST00000622953 1884 ntBASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 RPL7P3-201ENST00000441388 714 ntBASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 FO681548.1-201ENST00000455617 1132 ntBASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AP001889.1-201ENST00000525414 633 ntBASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AC068587.3-201ENST00000526613 355 ntBASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 BRI3BPP1-201ENST00000594224 787 ntBASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AC107373.2-201ENST00000607735 490 ntBASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB1Q9Y5F3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.21■□□□□ 0.02
PCDHB1Q9Y5F3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AC005229.1-201ENST00000392885 409 ntBASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AL645937.2-201ENST00000396808 931 ntBASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms