Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA1Q9UND3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AC138035.3-201ENST00000622706 2791 ntBASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AC023157.3-201ENST00000619086 2088 ntBASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 RNA5SP412-201ENST00000516234 123 ntBASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AP000812.2-201ENST00000538934 718 ntBASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AL109954.1-202ENST00000564051 2148 ntBASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA1Q9UND3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms