Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AP000593.2-201ENST00000542775 1433 ntBASIC18.32■□□□□ 0.52
DENND2AQ9ULE3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 AC023024.2-201ENST00000623561 1993 ntBASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 AC004945.1-201ENST00000416738 983 ntBASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 KRT8P13-201ENST00000463294 1010 ntBASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 MIR3615-201ENST00000581999 87 ntBASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 AP000845.1-201ENST00000581677 2131 ntBASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND2AQ9ULE3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 LILRP1-201ENST00000444199 1370 ntBASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 DBET-201ENST00000630918 3363 ntBASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 AL133338.1-201ENST00000565695 1517 ntBASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 HIST2H2BB-201ENST00000449108 381 ntBASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 AP001258.2-201ENST00000529891 490 ntBASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 MROH4P-201ENST00000431302 1578 ntBASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND2AQ9ULE3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms