Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.01■□□□□ 0.31
COL20A1Q9P218 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 SCARNA20.5-201ENST00000516991 142 ntBASIC17.01■□□□□ 0.31
COL20A1Q9P218 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 AC013726.1-201ENST00000563747 2285 ntBASIC17.01■□□□□ 0.31
COL20A1Q9P218 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17■□□□□ 0.31
COL20A1Q9P218 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17■□□□□ 0.31
COL20A1Q9P218 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 KLF2P1-201ENST00000447438 1042 ntBASIC17■□□□□ 0.31
COL20A1Q9P218 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL20A1Q9P218 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17■□□□□ 0.31
COL20A1Q9P218 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17■□□□□ 0.31
COL20A1Q9P218 AC020914.3-201ENST00000594712 304 ntBASIC17■□□□□ 0.31
COL20A1Q9P218 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL20A1Q9P218 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17■□□□□ 0.31
COL20A1Q9P218 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17■□□□□ 0.31
COL20A1Q9P218 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
COL20A1Q9P218 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL20A1Q9P218 SALL4P5-201ENST00000419001 1760 ntBASIC17■□□□□ 0.31
COL20A1Q9P218 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 AC006486.2-201ENST00000624246 2199 ntBASIC16.99■□□□□ 0.31
COL20A1Q9P218 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 AC022532.1-201ENST00000624563 1728 ntBASIC16.99■□□□□ 0.31
COL20A1Q9P218 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 DPM3-202ENST00000368399 517 ntBASIC16.99■□□□□ 0.31
COL20A1Q9P218 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 AC005077.2-201ENST00000449786 690 ntBASIC16.99■□□□□ 0.31
COL20A1Q9P218 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL20A1Q9P218 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.99■□□□□ 0.31
COL20A1Q9P218 BNIP3P13-201ENST00000599968 566 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms