Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 RNA5SP415-201ENST00000517246 115 ntBASIC13.06□□□□□ -0.32
COMMD9Q9P000 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 RN7SL510P-201ENST00000581311 263 ntBASIC13.06□□□□□ -0.32
COMMD9Q9P000 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 AL031008.1-201ENST00000619963 541 ntBASIC13.06□□□□□ -0.32
COMMD9Q9P000 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 IGHV3-22-201ENST00000520721 359 ntBASIC13.05□□□□□ -0.32
COMMD9Q9P000 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 AP001005.1-201ENST00000571755 1248 ntBASIC13.05□□□□□ -0.32
COMMD9Q9P000 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 AC113367.3-201ENST00000508316 1912 ntBASIC13.05□□□□□ -0.32
COMMD9Q9P000 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD9Q9P000 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD9Q9P000 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms