Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 AC004466.1-201ENST00000599515 1080 ntBASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 AC004923.1-202ENST00000642106 209 ntBASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 AC126177.1-201ENST00000547829 2218 ntBASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 AL137783.1-201ENST00000623494 1896 ntBASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 AL136309.1-201ENST00000403917 691 ntBASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 FGFR3P1-201ENST00000449999 601 ntBASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 CEP164P1-201ENST00000455142 418 ntBASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 RN7SL818P-201ENST00000485099 259 ntBASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 AC026434.2-201ENST00000506094 1078 ntBASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 AC103988.2-201ENST00000561804 725 ntBASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 AC020922.3-201ENST00000595064 547 ntBASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 RN7SL725P-201ENST00000606439 259 ntBASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM7Q9NR12 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 LILRP1-201ENST00000444199 1370 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 AC006335.1-201ENST00000445200 547 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 AC098935.1-201ENST00000446057 611 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 AC104073.2-201ENST00000453737 312 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 RN7SL181P-201ENST00000462921 277 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 AC019193.1-201ENST00000506678 823 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 MARK2P5-201ENST00000507649 634 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 NPM1P43-201ENST00000558669 786 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 RN7SL163P-201ENST00000583100 276 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 COX6A1P2-201ENST00000620597 330 ntBASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms