Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORD3B-2-202ENST00000571722 791 ntBASIC16.85■□□□□ 0.29
VTA1Q9NP79 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VTA1Q9NP79 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VTA1Q9NP79 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTA1Q9NP79 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VTA1Q9NP79 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTA1Q9NP79 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTA1Q9NP79 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VTA1Q9NP79 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VTA1Q9NP79 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.85■□□□□ 0.29
VTA1Q9NP79 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.85■□□□□ 0.29
VTA1Q9NP79 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 MAGEA5-201ENST00000446757 942 ntBASIC16.84■□□□□ 0.29
VTA1Q9NP79 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 AL132994.2-201ENST00000603120 687 ntBASIC16.84■□□□□ 0.29
VTA1Q9NP79 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 PCDHA1-201ENST00000378133 2726 ntBASIC16.84■□□□□ 0.29
VTA1Q9NP79 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 AC003102.2-201ENST00000589195 1469 ntBASIC16.84■□□□□ 0.29
VTA1Q9NP79 AL157791.1-201ENST00000553667 1699 ntBASIC16.84■□□□□ 0.29
VTA1Q9NP79 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTA1Q9NP79 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VTA1Q9NP79 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VTA1Q9NP79 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VTA1Q9NP79 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VTA1Q9NP79 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 AC006335.1-201ENST00000445200 547 ntBASIC16.83■□□□□ 0.28
VTA1Q9NP79 AC012618.1-201ENST00000461223 412 ntBASIC16.83■□□□□ 0.28
VTA1Q9NP79 HLA-J-204ENST00000495278 958 ntBASIC16.83■□□□□ 0.28
VTA1Q9NP79 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 AC134698.3-201ENST00000523880 214 ntBASIC16.83■□□□□ 0.28
VTA1Q9NP79 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 AL160314.3-201ENST00000556041 767 ntBASIC16.83■□□□□ 0.28
VTA1Q9NP79 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.83■□□□□ 0.28
VTA1Q9NP79 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTA1Q9NP79 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.82■□□□□ 0.28
VTA1Q9NP79 AP000845.1-201ENST00000581677 2131 ntBASIC16.82■□□□□ 0.28
VTA1Q9NP79 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTA1Q9NP79 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTA1Q9NP79 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTA1Q9NP79 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VTA1Q9NP79 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTA1Q9NP79 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTA1Q9NP79 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTA1Q9NP79 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.82■□□□□ 0.28
VTA1Q9NP79 AC244394.1-201ENST00000435000 1665 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms