Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.2■□□□□ 0.02
MRM3Q9HC36 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRM3Q9HC36 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 RNU1-114P-201ENST00000365297 166 ntBASIC15.19■□□□□ 0.02
MRM3Q9HC36 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 MIR661-201ENST00000384842 89 ntBASIC15.19■□□□□ 0.02
MRM3Q9HC36 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 AP001582.1-201ENST00000525856 295 ntBASIC15.19■□□□□ 0.02
MRM3Q9HC36 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 AC027307.3-201ENST00000594262 1100 ntBASIC15.19■□□□□ 0.02
MRM3Q9HC36 AL132655.2-201ENST00000596276 594 ntBASIC15.19■□□□□ 0.02
MRM3Q9HC36 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRM3Q9HC36 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
MRM3Q9HC36 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 KLF2P2-201ENST00000416807 1039 ntBASIC15.18■□□□□ 0.02
MRM3Q9HC36 AC098850.1-201ENST00000419919 790 ntBASIC15.18■□□□□ 0.02
MRM3Q9HC36 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 TPT1P11-201ENST00000458482 498 ntBASIC15.18■□□□□ 0.02
MRM3Q9HC36 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 ENPP7P5-201ENST00000541031 1031 ntBASIC15.18■□□□□ 0.02
MRM3Q9HC36 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 AC133539.2-201ENST00000604757 467 ntBASIC15.18■□□□□ 0.02
MRM3Q9HC36 AP005019.2-201ENST00000615104 511 ntBASIC15.18■□□□□ 0.02
MRM3Q9HC36 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
MRM3Q9HC36 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRM3Q9HC36 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms