Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 AL138709.1-201ENST00000614840 1693 ntBASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 KRT90P-201ENST00000549264 1064 ntBASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6V0A4Q9HBG4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 AC104581.4-201ENST00000623126 3052 ntBASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 AC022616.1-201ENST00000518688 554 ntBASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 AC010328.2-201ENST00000597698 1111 ntBASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 REXO1L5P-201ENST00000622260 2098 ntBASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A4Q9HBG4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms