Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 FAM8A3P-201ENST00000427218 844 ntBASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 AC093214.1-201ENST00000511688 1107 ntBASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 AC011467.4-201ENST00000594891 528 ntBASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 AC012508.2-201ENST00000567613 1472 ntBASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 AC005089.1-201ENST00000619486 2241 ntBASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC68Q9H2F9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 AC000095.1-201ENST00000603208 874 ntBASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC68Q9H2F9 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 AC026748.1-201ENST00000624349 3251 ntBASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 AC007292.2-201ENST00000593524 1812 ntBASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 LINC01101-201ENST00000622953 1884 ntBASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 AC004890.2-204ENST00000481968 304 ntBASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC68Q9H2F9 AC036164.1-201ENST00000570544 333 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms