Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 REXO1L4P-201ENST00000605109 1937 ntBASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 AC089987.1-201ENST00000551654 2209 ntBASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 KLF2P3-201ENST00000451977 1087 ntBASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 AL079307.3-201ENST00000556114 283 ntBASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 AC015802.1-201ENST00000588104 1449 ntBASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.28□□□□□ -0.12
AMBRA1Q9C0C7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 Z97205.2-201ENST00000564697 1639 ntBASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 AC012508.2-201ENST00000567613 1472 ntBASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.27□□□□□ -0.12
AMBRA1Q9C0C7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 AL133267.1-201ENST00000398220 340 ntBASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms