Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AC015656.1-201ENST00000624209 3578 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 OR8S1-201ENST00000310194 1080 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AC026410.3-201ENST00000514280 936 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AL359711.2-201ENST00000563105 872 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AC132938.2-201ENST00000579188 680 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 APOC4-201ENST00000591600 348 ntTSL 3 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AC010319.3-201ENST00000597028 470 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ABBA01031660.1-201ENST00000635219 756 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 AL591163.1-201ENST00000641757 987 ntBASIC10.67□□□□□ -0.7
UPK3BQ9BT76 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 BLK-205ENST00000529894 2017 ntTSL 5 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
UPK3BQ9BT76 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 PRAL-201ENST00000624952 3286 ntBASIC10.66□□□□□ -0.7
UPK3BQ9BT76 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
UPK3BQ9BT76 BOLA2P3-201ENST00000404566 256 ntBASIC10.66□□□□□ -0.7
UPK3BQ9BT76 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms