Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.9□□□□□ -0.35
HDHD3Q9BSH5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.9□□□□□ -0.35
HDHD3Q9BSH5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
HDHD3Q9BSH5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
HDHD3Q9BSH5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HDHD3Q9BSH5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 HSPA7-201ENST00000445535 1927 ntBASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HDHD3Q9BSH5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 SPDYE7P-202ENST00000420373 878 ntBASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 AP000347.1-202ENST00000435868 847 ntBASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 AC112482.1-201ENST00000492080 688 ntBASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 SPDYE12P-201ENST00000618416 771 ntBASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 AL109936.8-201ENST00000641772 604 ntBASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 LILRP1-201ENST00000444199 1370 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms